Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs3110256 chr8:71938136 A/G XKR9 chr8:71581600-71702606:+ 0.64 5.98 2.11E-7 Box Plot
ACC rs3110257 chr8:71938151 A/G XKR9 chr8:71581600-71702606:+ 0.64 5.98 2.11E-7 Box Plot
ACC rs3110258 chr8:71938532 A/T XKR9 chr8:71581600-71702606:+ 0.64 5.98 2.11E-7 Box Plot
ACC rs3123037 chr1:245197515 T/C EFCAB2 chr1:245133007-245290466:+ 0.69 5.87 3.09E-7 Box Plot
ACC rs3170100 chr19:52888620 T/G ZNF880 chr19:52873170-52889048:+ 0.81 7.16 2.79E-9 Box Plot
ACC rs3207090 chr1:213068595 C/T LQK1 chr1:213029947-213031480:- 0.68 5.58 8.73E-7 Box Plot
ACC rs3214782 chr2:114466431 CT/C DDX11L2 chr2:114356613-114358838:- 0.74 5.58 8.79E-7 Box Plot
ACC rs33918743 chr5:96296584 GT/G ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot
ACC rs33998984 chr2:61380508 T/C C2orf74 chr2:61372203-61391964:+ 0.65 6.23 8.33E-8 Box Plot
ACC rs34029388 chr6:58669330 TA/T GUSBL2 chr6:58246159-58287724:- 0.67 5.38 1.82E-6 Box Plot
ACC rs34042354 chr8:71730961 A/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs34054275 chr19:42086239 T/C CEACAM21 chr19:42055886-42093197:+ 0.76 6.6 2.15E-8 Box Plot
ACC rs34085166 chr8:71608136 T/C XKR9 chr8:71581600-71702606:+ 0.71 6.71 1.44E-8 Box Plot
ACC rs34104510 chr17:62986016 AT/A AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs34171289 chr7:64491684 G/A INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot